Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TPSP2-201ENST00000561760 610 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AL136038.3-201ENST00000561909 1096 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC092329.2-201ENST00000598402 547 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AL450472.2-201ENST00000603663 1156 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 PCDHB18P-202ENST00000526308 3197 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 PMS2P7-201ENST00000506558 1336 ntBASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2AFB1P0C5Y9 AC073508.3-201ENST00000619697 1419 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AC055811.4-201ENST00000624039 1754 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CICP1-201ENST00000416803 2410 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms