Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RARRES2P9-201ENST00000565168 469 ntBASIC17.06■□□□□ 0.32
TPM3P06753 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.06■□□□□ 0.32
TPM3P06753 AC092865.6-201ENST00000642101 219 ntBASIC17.06■□□□□ 0.32
TPM3P06753 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 AC131212.3-201ENST00000624087 4219 ntBASIC17.06■□□□□ 0.32
TPM3P06753 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TPM3P06753 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TPM3P06753 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.05■□□□□ 0.32
TPM3P06753 FAM58CP-201ENST00000435741 640 ntBASIC17.05■□□□□ 0.32
TPM3P06753 TMEM198B-204ENST00000484016 896 ntBASIC17.05■□□□□ 0.32
TPM3P06753 AC079140.1-201ENST00000508039 487 ntBASIC17.05■□□□□ 0.32
TPM3P06753 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM3P06753 LINC01225-203ENST00000563550 1244 ntBASIC17.05■□□□□ 0.32
TPM3P06753 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.05■□□□□ 0.32
TPM3P06753 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM3P06753 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM3P06753 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TPM3P06753 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM3P06753 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TPM3P06753 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM3P06753 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM3P06753 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 ADH5P3-201ENST00000433842 1137 ntBASIC17.04■□□□□ 0.32
TPM3P06753 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM3P06753 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.04■□□□□ 0.32
TPM3P06753 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 AC055717.3-201ENST00000622967 595 ntBASIC17.04■□□□□ 0.32
TPM3P06753 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms