Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 AC105021.1-202ENST00000570572 669 ntBASIC13.42□□□□□ -0.26
KDM4BO94953 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.42□□□□□ -0.26
KDM4BO94953 MIR4469-201ENST00000583919 79 ntBASIC13.42□□□□□ -0.26
KDM4BO94953 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
KDM4BO94953 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.42□□□□□ -0.26
KDM4BO94953 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.42□□□□□ -0.26
KDM4BO94953 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.42□□□□□ -0.26
KDM4BO94953 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 AL031595.1-201ENST00000623969 4709 ntBASIC13.42□□□□□ -0.26
KDM4BO94953 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.42□□□□□ -0.26
KDM4BO94953 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 MTHFR-210ENST00000641407 2387 ntBASIC13.42□□□□□ -0.26
KDM4BO94953 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KDM4BO94953 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.42□□□□□ -0.26
KDM4BO94953 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 AC131212.3-201ENST00000624087 4219 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 AZGP1P1-201ENST00000411909 902 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 AC004461.1-201ENST00000412461 403 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 FAM58DP-201ENST00000428076 619 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.41□□□□□ -0.26
KDM4BO94953 AP000344.2-201ENST00000512987 629 ntBASIC13.41□□□□□ -0.26
KDM4BO94953 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.41□□□□□ -0.26
KDM4BO94953 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KDM4BO94953 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.41□□□□□ -0.26
KDM4BO94953 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KDM4BO94953 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
KDM4BO94953 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.4□□□□□ -0.26
KDM4BO94953 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms