Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC055811.4-201ENST00000624039 1754 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC254562.1-201ENST00000417586 456 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 UPF3AP3-201ENST00000420996 769 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SDHAP3-202ENST00000515467 728 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC010336.2-201ENST00000564226 506 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SAMD11P1-201ENST00000571429 661 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC000095.1-201ENST00000603208 874 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 TEX28P1-201ENST00000613479 1221 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 TEX28P2-201ENST00000617764 1221 ntBASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRBV6-7A0A0A0MS04 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TRBV6-7A0A0A0MS04 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 LILRP1-201ENST00000444199 1370 ntBASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms