Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 AC016694.1-201ENST00000434179 700 ntBASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 SERPINA7P1-201ENST00000443077 631 ntBASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 AC026434.2-201ENST00000506094 1078 ntBASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 HILS1-202ENST00000545329 423 ntBASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 AC025279.2-201ENST00000569730 653 ntBASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AL161772.1-201ENST00000610494 4412 ntBASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 C2orf27AP3-201ENST00000434123 579 ntBASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AC004466.1-201ENST00000599515 1080 ntBASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AL354718.3-201ENST00000616414 581 ntBASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 CR382287.1-201ENST00000623954 586 ntBASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDHGC4Q9Y5F7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 PDIA3P1-201ENST00000471856 1510 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms