Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 RN7SL837P-201ENST00000463010 287 ntBASIC14.24□□□□□ -0.13
CNIH4Q9P003 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AL359711.2-201ENST00000563105 872 ntBASIC14.24□□□□□ -0.13
CNIH4Q9P003 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 CU634019.7-201ENST00000624153 1185 ntBASIC14.24□□□□□ -0.13
CNIH4Q9P003 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 FP236241.2-201ENST00000624906 1185 ntBASIC14.24□□□□□ -0.13
CNIH4Q9P003 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNIH4Q9P003 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNIH4Q9P003 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 AC097376.2-205ENST00000610159 5334 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 AC139749.1-202ENST00000617529 3139 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 RPL5P21-201ENST00000404620 815 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 AC124283.3-201ENST00000570869 594 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 AC015936.2-201ENST00000593177 259 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.23□□□□□ -0.13
CNIH4Q9P003 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 DRD5P1-201ENST00000456605 1438 ntBASIC14.23□□□□□ -0.13
CNIH4Q9P003 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNIH4Q9P003 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNIH4Q9P003 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.22□□□□□ -0.13
CNIH4Q9P003 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.22□□□□□ -0.13
CNIH4Q9P003 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
CNIH4Q9P003 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.22□□□□□ -0.13
CNIH4Q9P003 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNIH4Q9P003 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms