Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.59□□□□□ -0.39
S1PR3Q99500 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.59□□□□□ -0.39
S1PR3Q99500 AC114501.2-201ENST00000439631 535 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.59□□□□□ -0.39
S1PR3Q99500 MEIS3P1-201ENST00000495167 958 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 AC092337.1-201ENST00000568699 1129 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 AC009407.1-201ENST00000568958 598 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.59□□□□□ -0.39
S1PR3Q99500 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 AC000095.1-201ENST00000603208 874 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 AL355385.1-201ENST00000606123 409 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.59□□□□□ -0.39
S1PR3Q99500 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
S1PR3Q99500 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
S1PR3Q99500 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 INTS4P1-203ENST00000641008 3683 ntBASIC12.59□□□□□ -0.39
S1PR3Q99500 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.59□□□□□ -0.39
S1PR3Q99500 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.59□□□□□ -0.39
S1PR3Q99500 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
S1PR3Q99500 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
S1PR3Q99500 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
S1PR3Q99500 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
S1PR3Q99500 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.58□□□□□ -0.39
S1PR3Q99500 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
S1PR3Q99500 REXO1L2P-201ENST00000425429 2069 ntBASIC12.58□□□□□ -0.39
S1PR3Q99500 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
S1PR3Q99500 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
S1PR3Q99500 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.58□□□□□ -0.39
S1PR3Q99500 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
S1PR3Q99500 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 ACE3P-201ENST00000423435 1973 ntBASIC12.58□□□□□ -0.4
S1PR3Q99500 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.58□□□□□ -0.4
S1PR3Q99500 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.58□□□□□ -0.4
S1PR3Q99500 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.58□□□□□ -0.4
S1PR3Q99500 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
S1PR3Q99500 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.58□□□□□ -0.4
S1PR3Q99500 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.58□□□□□ -0.4
S1PR3Q99500 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.58□□□□□ -0.4
S1PR3Q99500 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
S1PR3Q99500 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms