Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF31Q96EP0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF31Q96EP0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF31Q96EP0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF31Q96EP0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF31Q96EP0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
RNF31Q96EP0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RNF31Q96EP0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF31Q96EP0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 FAM21FP-201ENST00000426241 1131 ntBASIC14.7□□□□□ -0.06
RNF31Q96EP0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 FAM8A2P-201ENST00000528813 1142 ntBASIC14.7□□□□□ -0.06
RNF31Q96EP0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PPT1-215ENST00000641471 2368 ntBASIC14.7□□□□□ -0.06
RNF31Q96EP0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF31Q96EP0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF31Q96EP0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AL138799.1-201ENST00000448213 1675 ntBASIC14.69□□□□□ -0.06
RNF31Q96EP0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 AC243960.2-201ENST00000600996 747 ntBASIC14.69□□□□□ -0.06
RNF31Q96EP0 ECM1P1-201ENST00000604092 1279 ntBASIC14.69□□□□□ -0.06
RNF31Q96EP0 AC025181.2-201ENST00000606994 802 ntBASIC14.69□□□□□ -0.06
RNF31Q96EP0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF31Q96EP0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNF31Q96EP0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF31Q96EP0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF31Q96EP0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF31Q96EP0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF31Q96EP0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF31Q96EP0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF31Q96EP0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms