Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 LINC01101-201ENST00000622953 1884 ntBASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 REXO1L4P-201ENST00000605109 1937 ntBASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF439Q8NDP4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 PMS2P2-201ENST00000425039 1128 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 BASP1P1-201ENST00000430708 665 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 GAPDHP40-201ENST00000505218 1006 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 AC104794.3-201ENST00000566840 1248 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CLK3P2-201ENST00000427566 1453 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 AC012508.2-201ENST00000567613 1472 ntBASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms