Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AL137783.1-201ENST00000623494 1896 ntBASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 ACKR1-201ENST00000368121 1240 ntBASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 AL359711.2-201ENST00000563105 872 ntBASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 SPDYE22P-201ENST00000582158 798 ntBASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 LINC02560-201ENST00000596379 459 ntBASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 AP005019.2-201ENST00000615104 511 ntBASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF440Q8IYI8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 PIN1P1-201ENST00000412108 996 ntBASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 AL162726.2-201ENST00000438986 1017 ntBASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 BCRP1-201ENST00000444246 691 ntBASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF440Q8IYI8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms