Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ENPP7P8-202ENST00000527856 1345 ntBASIC10.28□□□□□ -0.76
CSMD3Q7Z407 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CSMD3Q7Z407 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 SNX15-201ENST00000352068 771 ntTSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 CHCHD2P9-201ENST00000461726 456 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TMBIM7P-202ENST00000641474 1516 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 RNA5SP359-201ENST00000364838 113 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TREHP1-201ENST00000531328 465 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 STK16-203ENST00000409516 895 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 RPSAP15-201ENST00000448168 861 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 PTPN20CP-201ENST00000614090 920 ntBASIC10.27□□□□□ -0.77
CSMD3Q7Z407 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
CSMD3Q7Z407 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms