Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 HLA-J-204ENST00000495278 958 ntBASIC17.97■□□□□ 0.47
PDS5AQ29RF7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 AL590440.2-201ENST00000641973 1595 ntBASIC17.96■□□□□ 0.47
PDS5AQ29RF7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDS5AQ29RF7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AL157407.1-201ENST00000435784 904 ntBASIC17.96■□□□□ 0.46
PDS5AQ29RF7 KLF2P1-201ENST00000447438 1042 ntBASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AC005077.2-201ENST00000449786 690 ntBASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AL132994.2-201ENST00000603120 687 ntBASIC17.96■□□□□ 0.46
PDS5AQ29RF7 MIR6720-201ENST00000611664 98 ntBASIC17.96■□□□□ 0.46
PDS5AQ29RF7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
PDS5AQ29RF7 AL008718.2-201ENST00000609206 1313 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AL645933.1-201ENST00000440087 609 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AC026740.1-201ENST00000607068 791 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AC090164.2-201ENST00000611487 516 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AL136295.7-201ENST00000619226 1200 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AC027601.3-201ENST00000622907 509 ntBASIC17.95■□□□□ 0.46
PDS5AQ29RF7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDS5AQ29RF7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 LINC00554-201ENST00000564841 3011 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AL596257.1-201ENST00000641463 2694 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms