Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPFP62306 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 SALL4P5-201ENST00000419001 1760 ntBASIC16.41■□□□□ 0.22
SNRPFP62306 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNRPFP62306 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.41■□□□□ 0.22
SNRPFP62306 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.41■□□□□ 0.22
SNRPFP62306 AC131206.1-201ENST00000538078 1211 ntBASIC16.41■□□□□ 0.22
SNRPFP62306 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.41■□□□□ 0.22
SNRPFP62306 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.41■□□□□ 0.22
SNRPFP62306 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPFP62306 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPFP62306 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNRPFP62306 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRPFP62306 AP000593.2-201ENST00000542775 1433 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 ARSEP1-201ENST00000420443 635 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 AC007551.1-201ENST00000457394 519 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 ALG3P1-201ENST00000508806 1114 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SNRPFP62306 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRPFP62306 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 AC018529.2-202ENST00000611482 3087 ntBASIC16.4■□□□□ 0.22
SNRPFP62306 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNRPFP62306 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SNRPFP62306 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPFP62306 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRPFP62306 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRPFP62306 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SNRPFP62306 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRPFP62306 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRPFP62306 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPFP62306 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms