Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D3P61077 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D3P61077 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D3P61077 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 ACE3P-201ENST00000423435 1973 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 KRT18P64-201ENST00000434946 1219 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 RPL13P2-201ENST00000440687 659 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 KRT18P43-201ENST00000469825 1281 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D3P61077 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D3P61077 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
UBE2D3P61077 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D3P61077 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 AC012508.2-201ENST00000567613 1472 ntBASIC10.87□□□□□ -0.67
UBE2D3P61077 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D3P61077 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 AC126335.2-201ENST00000623362 4637 ntBASIC10.86□□□□□ -0.67
UBE2D3P61077 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D3P61077 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 PPT1-213ENST00000641319 2388 ntBASIC10.86□□□□□ -0.67
UBE2D3P61077 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D3P61077 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D3P61077 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.86□□□□□ -0.67
UBE2D3P61077 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
UBE2D3P61077 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms