Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDK7P50613 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK7P50613 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 AC010141.1-201ENST00000411585 623 ntBASIC16.67■□□□□ 0.26
CDK7P50613 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK7P50613 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CDK7P50613 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 AC116345.2-201ENST00000512837 523 ntBASIC16.67■□□□□ 0.26
CDK7P50613 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK7P50613 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.67■□□□□ 0.26
CDK7P50613 AC012044.1-201ENST00000603431 297 ntBASIC16.67■□□□□ 0.26
CDK7P50613 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK7P50613 AC011491.1-203ENST00000637688 543 ntBASIC16.67■□□□□ 0.26
CDK7P50613 AC002472.3-201ENST00000640124 621 ntBASIC16.67■□□□□ 0.26
CDK7P50613 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK7P50613 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDK7P50613 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK7P50613 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK7P50613 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 SHC1P1-201ENST00000425230 1745 ntBASIC16.67■□□□□ 0.26
CDK7P50613 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK7P50613 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDK7P50613 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK7P50613 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 AC104640.1-201ENST00000562617 2109 ntBASIC16.66■□□□□ 0.26
CDK7P50613 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDK7P50613 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK7P50613 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 AC098935.1-201ENST00000446057 611 ntBASIC16.66■□□□□ 0.26
CDK7P50613 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 HLA-J-204ENST00000495278 958 ntBASIC16.66■□□□□ 0.26
CDK7P50613 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CDK7P50613 RTN3P1-201ENST00000536295 711 ntBASIC16.66■□□□□ 0.26
CDK7P50613 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CDK7P50613 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CDK7P50613 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CDK7P50613 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK7P50613 AC112504.1-201ENST00000623415 1841 ntBASIC16.66■□□□□ 0.26
CDK7P50613 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms