Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.38■□□□□ 0.05
CCND1P24385 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCND1P24385 PPT1-213ENST00000641319 2388 ntBASIC15.38■□□□□ 0.05
CCND1P24385 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.37■□□□□ 0.05
CCND1P24385 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCND1P24385 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.37■□□□□ 0.05
CCND1P24385 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 RPL37AP1-201ENST00000412502 279 ntBASIC15.37■□□□□ 0.05
CCND1P24385 AL645939.2-201ENST00000427340 991 ntBASIC15.37■□□□□ 0.05
CCND1P24385 HIST3H2BA-201ENST00000436555 524 ntBASIC15.37■□□□□ 0.05
CCND1P24385 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.37■□□□□ 0.05
CCND1P24385 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.37■□□□□ 0.05
CCND1P24385 HNRNPUP1-201ENST00000554987 333 ntBASIC15.37■□□□□ 0.05
CCND1P24385 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 SPDYE12P-201ENST00000618416 771 ntBASIC15.37■□□□□ 0.05
CCND1P24385 AL033527.5-202ENST00000641632 1098 ntBASIC15.37■□□□□ 0.05
CCND1P24385 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.37■□□□□ 0.05
CCND1P24385 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.37■□□□□ 0.05
CCND1P24385 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.37■□□□□ 0.05
CCND1P24385 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCND1P24385 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCND1P24385 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CCND1P24385 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.36■□□□□ 0.05
CCND1P24385 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.36■□□□□ 0.05
CCND1P24385 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.36■□□□□ 0.05
CCND1P24385 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 MIR4313-201ENST00000580760 101 ntBASIC15.36■□□□□ 0.05
CCND1P24385 TEX28P1-201ENST00000613479 1221 ntBASIC15.36■□□□□ 0.05
CCND1P24385 AL138828.2-201ENST00000615812 383 ntBASIC15.36■□□□□ 0.05
CCND1P24385 TEX28P2-201ENST00000617764 1221 ntBASIC15.36■□□□□ 0.05
CCND1P24385 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCND1P24385 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.36■□□□□ 0.05
CCND1P24385 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
CCND1P24385 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CCND1P24385 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCND1P24385 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.36■□□□□ 0.05
CCND1P24385 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms