Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
TNFRSF1BP20333 AC136759.1-202ENST00000530858 2194 ntBASIC14.15□□□□□ -0.15
TNFRSF1BP20333 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 SAMD11P1-201ENST00000571429 661 ntBASIC14.14□□□□□ -0.15
TNFRSF1BP20333 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 Z92544.3-201ENST00000624747 417 ntBASIC14.14□□□□□ -0.15
TNFRSF1BP20333 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 AC010327.5-201ENST00000586923 3061 ntBASIC14.14□□□□□ -0.15
TNFRSF1BP20333 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFRSF1BP20333 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 AC079781.5-202ENST00000641784 3743 ntBASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms