Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.61□□□□□ -0.23
APOA1P02647 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 MRPL20P1-201ENST00000400819 433 ntBASIC13.61□□□□□ -0.23
APOA1P02647 RPL5P21-201ENST00000404620 815 ntBASIC13.61□□□□□ -0.23
APOA1P02647 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOA1P02647 KRT18P27-201ENST00000427733 1299 ntBASIC13.61□□□□□ -0.23
APOA1P02647 FGFR3P6-201ENST00000457012 610 ntBASIC13.61□□□□□ -0.23
APOA1P02647 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 AC025062.2-201ENST00000605477 670 ntBASIC13.61□□□□□ -0.23
APOA1P02647 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 AC107918.4-202ENST00000641623 219 ntBASIC13.61□□□□□ -0.23
APOA1P02647 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.61□□□□□ -0.23
APOA1P02647 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOA1P02647 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 OR2I1P-208ENST00000641137 4948 ntBASIC13.61□□□□□ -0.23
APOA1P02647 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOA1P02647 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA1P02647 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOA1P02647 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 AC073621.1-201ENST00000392730 636 ntBASIC13.6□□□□□ -0.23
APOA1P02647 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 AC004945.1-201ENST00000416738 983 ntBASIC13.6□□□□□ -0.23
APOA1P02647 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.6□□□□□ -0.23
APOA1P02647 AC109635.5-201ENST00000533593 962 ntBASIC13.6□□□□□ -0.23
APOA1P02647 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.6□□□□□ -0.23
APOA1P02647 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.6□□□□□ -0.23
APOA1P02647 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA1P02647 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA1P02647 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA1P02647 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA1P02647 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA1P02647 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOA1P02647 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOA1P02647 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA1P02647 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
APOA1P02647 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA1P02647 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.59□□□□□ -0.23
APOA1P02647 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms