Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.54□□□□□ -0.24
ZNF254O75437 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.54□□□□□ -0.24
ZNF254O75437 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 REXO1L4P-201ENST00000605109 1937 ntBASIC13.54□□□□□ -0.24
ZNF254O75437 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF254O75437 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF254O75437 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF254O75437 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF254O75437 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZNF254O75437 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 AC007614.4-201ENST00000564048 1827 ntBASIC13.53□□□□□ -0.24
ZNF254O75437 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF254O75437 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 RN7SL618P-201ENST00000477850 296 ntBASIC13.53□□□□□ -0.24
ZNF254O75437 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF254O75437 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF254O75437 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.53□□□□□ -0.24
ZNF254O75437 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF254O75437 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 AF228730.6-201ENST00000641497 218 ntBASIC13.53□□□□□ -0.24
ZNF254O75437 AC084121.3-201ENST00000641716 218 ntBASIC13.53□□□□□ -0.24
ZNF254O75437 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF254O75437 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF254O75437 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF254O75437 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF254O75437 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
ZNF254O75437 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ZNF254O75437 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF254O75437 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF254O75437 MTHFR-210ENST00000641407 2387 ntBASIC13.52□□□□□ -0.24
ZNF254O75437 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF254O75437 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
ZNF254O75437 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF254O75437 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF254O75437 CNN2P11-201ENST00000429351 262 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms