Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC069262.1-201ENST00000539058 672 ntBASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC010327.4-202ENST00000591484 748 ntBASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV6-7A0A0A0MS04 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC211486.1-202ENST00000416371 468 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TPT1P11-201ENST00000458482 498 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 RN7SL618P-201ENST00000477850 296 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMEM198B-204ENST00000484016 896 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC211476.1-201ENST00000503899 468 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL512361.1-201ENST00000554200 418 ntBASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV6-7A0A0A0MS04 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms