Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AC106818.1-201ENST00000623223 3242 ntBASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AC022447.6-201ENST00000515522 438 ntBASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AL139424.1-201ENST00000607572 797 ntBASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SPTSSB-204ENST00000617024 1292 ntBASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AL138966.2-201ENST00000621997 464 ntBASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRAPPC1Q9Y5R8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
TRAPPC1Q9Y5R8 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 AC012569.1-201ENST00000591191 1524 ntBASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRAPPC1Q9Y5R8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms