Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 TUBB1P2-201ENST00000422712 1306 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 TUBB1P1-201ENST00000503144 1300 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 KRT18P43-201ENST00000469825 1281 ntBASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 AC091951.1-201ENST00000512854 2465 ntBASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 AC011270.2-201ENST00000624293 2550 ntBASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FNDC3AQ9Y2H6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
FNDC3AQ9Y2H6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 RNA5SP412-201ENST00000516234 123 ntBASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms