Protein–RNA interactions for Protein: Q9NRF2

SH2B1, SH2B adapter protein 1, humanhuman

Predicted RBP Predictions only

Length 756 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1Q9NRF2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 DOC2GP-202ENST00000514950 1163 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC023310.3-201ENST00000557027 670 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC100756.1-201ENST00000562736 682 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC138749.3-201ENST00000567691 622 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC116165.1-201ENST00000611806 668 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 HSPA7-201ENST00000445535 1927 ntBASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SH2B1Q9NRF2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 BRI3BPP1-201ENST00000594224 787 ntBASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 AC055811.4-201ENST00000624039 1754 ntBASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SH2B1Q9NRF2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 MRPS18AP1-201ENST00000414458 589 ntBASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 AL512638.1-201ENST00000457493 794 ntBASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2B1Q9NRF2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms