Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC012441.2-201ENST00000444843 739 ntBASIC16.47■□□□□ 0.23
HIPK3Q9H422 POU5F1P2-201ENST00000521750 823 ntBASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC135983.4-201ENST00000564116 1262 ntBASIC16.47■□□□□ 0.23
HIPK3Q9H422 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC112504.1-201ENST00000623415 1841 ntBASIC16.47■□□□□ 0.23
HIPK3Q9H422 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC020910.5-201ENST00000623668 1865 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC011840.2-201ENST00000563063 1520 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 RPSAP31-201ENST00000416648 895 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC132192.2-201ENST00000596206 1147 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AC092127.1-201ENST00000567093 3455 ntBASIC16.46■□□□□ 0.23
HIPK3Q9H422 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK3Q9H422 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK3Q9H422 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.46■□□□□ 0.22
HIPK3Q9H422 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK3Q9H422 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK3Q9H422 AL008718.2-201ENST00000609206 1313 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 MBLAC2-202ENST00000514906 1936 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms