Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 GAPDHP40-201ENST00000505218 1006 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC107373.2-201ENST00000607735 490 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AL157414.3-201ENST00000624276 1954 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC023908.3-201ENST00000564211 3047 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 DRD5P1-201ENST00000456605 1438 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX6Q8HWS3 AC015656.1-201ENST00000624209 3578 ntBASIC15.85■□□□□ 0.13
RFX6Q8HWS3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 GNAQP1-201ENST00000444815 1067 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 VDAC1P7-201ENST00000462417 847 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AC092183.1-201ENST00000469884 875 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 RN7SL399P-201ENST00000471648 279 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 RFPL4AP1-201ENST00000530883 850 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AL360270.3-201ENST00000609118 1348 ntBASIC15.84■□□□□ 0.13
RFX6Q8HWS3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX6Q8HWS3 AC018529.2-202ENST00000611482 3087 ntBASIC15.83■□□□□ 0.13
RFX6Q8HWS3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX6Q8HWS3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 PMS2P2-201ENST00000425039 1128 ntBASIC15.83■□□□□ 0.12
RFX6Q8HWS3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.83■□□□□ 0.12
RFX6Q8HWS3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.83■□□□□ 0.12
RFX6Q8HWS3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX6Q8HWS3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms