Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC25Q86WR0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC25Q86WR0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC25Q86WR0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC25Q86WR0 AC084121.4-201ENST00000641598 221 ntBASIC15.77■□□□□ 0.12
CCDC25Q86WR0 AF228730.8-201ENST00000642140 221 ntBASIC15.77■□□□□ 0.12
CCDC25Q86WR0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC25Q86WR0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AC015910.1-201ENST00000579400 975 ntBASIC15.76■□□□□ 0.11
CCDC25Q86WR0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AC018529.1-201ENST00000613063 361 ntBASIC15.76■□□□□ 0.11
CCDC25Q86WR0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC25Q86WR0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.75■□□□□ 0.11
CCDC25Q86WR0 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 SLED1-202ENST00000512051 380 ntBASIC15.75■□□□□ 0.11
CCDC25Q86WR0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms