Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.51■□□□□ 0.39
USP50Q70EL3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP50Q70EL3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.5■□□□□ 0.39
USP50Q70EL3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
USP50Q70EL3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.5■□□□□ 0.39
USP50Q70EL3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.5■□□□□ 0.39
USP50Q70EL3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
USP50Q70EL3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 OR2R1P-201ENST00000441404 914 ntBASIC17.5■□□□□ 0.39
USP50Q70EL3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 AC007952.4-201ENST00000573866 637 ntBASIC17.5■□□□□ 0.39
USP50Q70EL3 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.5■□□□□ 0.39
USP50Q70EL3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.5■□□□□ 0.39
USP50Q70EL3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP50Q70EL3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.5■□□□□ 0.39
USP50Q70EL3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP50Q70EL3 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP50Q70EL3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.49■□□□□ 0.39
USP50Q70EL3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.49■□□□□ 0.39
USP50Q70EL3 MIR2392-201ENST00000584881 84 ntBASIC17.49■□□□□ 0.39
USP50Q70EL3 AC007250.1-201ENST00000608934 338 ntBASIC17.49■□□□□ 0.39
USP50Q70EL3 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP50Q70EL3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 AL359258.3-201ENST00000622910 2331 ntBASIC17.49■□□□□ 0.39
USP50Q70EL3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP50Q70EL3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.49■□□□□ 0.39
USP50Q70EL3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 AC021305.1-201ENST00000520656 1514 ntBASIC17.48■□□□□ 0.39
USP50Q70EL3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.48■□□□□ 0.39
USP50Q70EL3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP50Q70EL3 AC009090.5-201ENST00000624886 2285 ntBASIC17.48■□□□□ 0.39
USP50Q70EL3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP50Q70EL3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms