Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AL136172.1-201ENST00000598590 1394 ntBASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AP002353.1-201ENST00000528257 1599 ntBASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 MIR645-201ENST00000385283 94 ntBASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 AC073869.2-201ENST00000417338 1026 ntBASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 CICP23-201ENST00000605013 2741 ntBASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CDC42BPAQ5VT25 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
CDC42BPAQ5VT25 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 PPT1-215ENST00000641471 2368 ntBASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 OR8T1P-201ENST00000421347 918 ntBASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 DRG2-220ENST00000583355 891 ntTSL 3 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 KRT8P1-201ENST00000557533 1207 ntBASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 ELP5-212ENST00000574255 671 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 RN7SL665P-201ENST00000578793 300 ntBASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 MIR2392-201ENST00000584881 84 ntBASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC22.26■■□□□ 1.15
CDC42BPAQ5VT25 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC007952.4-201ENST00000573866 637 ntBASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC009084.3-201ENST00000623356 437 ntBASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms