Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC092865.5-201ENST00000545435 363 ntBASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC068137.2-201ENST00000605408 478 ntBASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC026979.3-201ENST00000607315 403 ntBASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC008267.7-201ENST00000624570 1194 ntBASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AC002056.1-201ENST00000395613 760 ntBASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AC018845.2-201ENST00000568326 409 ntBASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AP002472.1-201ENST00000577490 586 ntBASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 AC126335.2-201ENST00000623362 4637 ntBASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ANKRD55Q3KP44 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ANKRD55Q3KP44 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms