Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.27□□□□□ -0.13
CDH15P55291 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH15P55291 AC074386.1-202ENST00000463561 864 ntBASIC14.27□□□□□ -0.13
CDH15P55291 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH15P55291 MIR4515-201ENST00000584082 81 ntBASIC14.27□□□□□ -0.13
CDH15P55291 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH15P55291 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH15P55291 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH15P55291 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH15P55291 AC083964.2-201ENST00000623988 2396 ntBASIC14.27□□□□□ -0.13
CDH15P55291 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDH15P55291 AC023090.2-201ENST00000625182 2110 ntBASIC14.27□□□□□ -0.13
CDH15P55291 AC018442.1-201ENST00000421439 2061 ntBASIC14.27□□□□□ -0.13
CDH15P55291 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH15P55291 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CDH15P55291 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH15P55291 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDH15P55291 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDH15P55291 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH15P55291 FAM58CP-201ENST00000435741 640 ntBASIC14.26□□□□□ -0.13
CDH15P55291 FAM185BP-201ENST00000443595 716 ntBASIC14.26□□□□□ -0.13
CDH15P55291 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH15P55291 ACTG1P14-201ENST00000446382 1122 ntBASIC14.26□□□□□ -0.13
CDH15P55291 CXCL1P1-201ENST00000502804 216 ntBASIC14.26□□□□□ -0.13
CDH15P55291 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH15P55291 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH15P55291 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH15P55291 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH15P55291 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDH15P55291 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.25□□□□□ -0.13
CDH15P55291 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms