Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 AC012508.2-201ENST00000567613 1472 ntBASIC12.78□□□□□ -0.36
CXCL3P19876 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CXCL3P19876 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
CXCL3P19876 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCL3P19876 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 AC106795.1-205ENST00000512851 1056 ntBASIC12.78□□□□□ -0.36
CXCL3P19876 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCL3P19876 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.78□□□□□ -0.36
CXCL3P19876 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL3P19876 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL3P19876 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL3P19876 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCL3P19876 AL607033.1-201ENST00000623900 1599 ntBASIC12.77□□□□□ -0.36
CXCL3P19876 VENTXP1-201ENST00000569334 2716 ntBASIC12.77□□□□□ -0.36
CXCL3P19876 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
CXCL3P19876 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CXCL3P19876 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CXCL3P19876 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCL3P19876 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 AL136982.4-201ENST00000437689 1740 ntBASIC12.77□□□□□ -0.36
CXCL3P19876 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCL3P19876 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL3P19876 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL3P19876 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCL3P19876 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.77□□□□□ -0.37
CXCL3P19876 KRT18P35-201ENST00000510488 1269 ntBASIC12.77□□□□□ -0.37
CXCL3P19876 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCL3P19876 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL3P19876 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CXCL3P19876 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCL3P19876 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCL3P19876 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.77□□□□□ -0.37
CXCL3P19876 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCL3P19876 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CXCL3P19876 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL3P19876 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL3P19876 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms