Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC188H7C350 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC188H7C350 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 ELL2P1-201ENST00000413990 1906 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 AGGF1P1-201ENST00000509500 2073 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 CETN4P-206ENST00000642099 2168 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC188H7C350 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 AL137784.3-201ENST00000623858 2288 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC188H7C350 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 AC026150.2-201ENST00000564693 1156 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 MTDHP5-201ENST00000598980 586 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 AC000095.1-201ENST00000603208 874 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 LINC01115-203ENST00000606068 577 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 AL589739.1-201ENST00000607720 493 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 AC120114.3-201ENST00000611923 658 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC188H7C350 KRT8P22-201ENST00000562317 1415 ntBASIC15.82■□□□□ 0.12
CCDC188H7C350 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC188H7C350 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC188H7C350 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC188H7C350 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC188H7C350 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC188H7C350 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC188H7C350 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC188H7C350 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC188H7C350 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC188H7C350 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC188H7C350 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC188H7C350 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC188H7C350 AC005252.3-201ENST00000623855 2258 ntBASIC15.81■□□□□ 0.12
CCDC188H7C350 AL513210.1-201ENST00000629608 234 ntBASIC15.81■□□□□ 0.12
CCDC188H7C350 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC188H7C350 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms