Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ACTBP8-201ENST00000403258 1108 ntBASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 AC007969.1-201ENST00000433675 447 ntBASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 AC091804.1-201ENST00000486888 567 ntBASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 EEF1DP1-201ENST00000585891 896 ntBASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AC015818.8-201ENST00000587907 1519 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 NUS1P3-201ENST00000423502 862 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 MTX1P1-201ENST00000440904 838 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HOMER2P2-201ENST00000451621 847 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AKR7A2P1-201ENST00000460134 915 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SNX18-202ENST00000343017 3140 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms