Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC023024.2-201ENST00000623561 1993 ntBASIC13.35□□□□□ -0.27
CDH20Q9HBT6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC124283.3-201ENST00000570869 594 ntBASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 BX539320.1-201ENST00000623759 877 ntBASIC13.35□□□□□ -0.27
CDH20Q9HBT6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 AC138035.3-201ENST00000622706 2791 ntBASIC13.35□□□□□ -0.27
CDH20Q9HBT6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDH20Q9HBT6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.34□□□□□ -0.27
CDH20Q9HBT6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 GHSR-202ENST00000427970 912 ntBASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms