Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRTM1Q9HBL6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MIR943-201ENST00000401286 94 ntBASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 AC241585.1-201ENST00000433527 519 ntBASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 METTL21AP1-201ENST00000438852 635 ntBASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 IGHV3-42-201ENST00000520410 361 ntBASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRTM1Q9HBL6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AC113367.3-201ENST00000508316 1912 ntBASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 BTBD7P1-201ENST00000447253 1453 ntBASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 TSSK5P-201ENST00000423978 907 ntBASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms