Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AC023024.2-201ENST00000623561 1993 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AC234782.1-201ENST00000451950 919 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 MIR6720-201ENST00000611664 98 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AL353726.2-201ENST00000623259 884 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 NAP1L6-202ENST00000641404 1222 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 AC136759.1-202ENST00000530858 2194 ntBASIC16.01■□□□□ 0.15
CASD1Q96PB1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.01■□□□□ 0.15
CASD1Q96PB1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASD1Q96PB1 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 SALL4P5-201ENST00000419001 1760 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16■□□□□ 0.15
CASD1Q96PB1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16■□□□□ 0.15
CASD1Q96PB1 AL353637.1-201ENST00000451571 732 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 AC116345.2-201ENST00000512837 523 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16■□□□□ 0.15
CASD1Q96PB1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16■□□□□ 0.15
CASD1Q96PB1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16■□□□□ 0.15
CASD1Q96PB1 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 AC009884.2-201ENST00000603110 324 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 AC027601.3-201ENST00000622907 509 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16■□□□□ 0.15
CASD1Q96PB1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 MROH4P-201ENST00000431302 1578 ntBASIC16■□□□□ 0.15
CASD1Q96PB1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16■□□□□ 0.15
CASD1Q96PB1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASD1Q96PB1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
CASD1Q96PB1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CASD1Q96PB1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms