Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC004461.1-201ENST00000412461 403 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 HIST3H2BA-201ENST00000436555 524 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC023141.5-201ENST00000458585 616 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AL079307.3-201ENST00000556114 283 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC026150.2-201ENST00000564693 1156 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AL589739.1-201ENST00000607720 493 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AC010327.5-201ENST00000586923 3061 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SPDYE14P-201ENST00000442619 822 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 KRT18P43-201ENST00000469825 1281 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 MIR4469-201ENST00000583919 79 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AL133215.2-201ENST00000609242 977 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 AC005912.2-201ENST00000619492 2400 ntBASIC13.31□□□□□ -0.28
CPNE2Q96FN4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 Z97205.2-201ENST00000564697 1639 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms