Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 AL359183.1-201ENST00000623796 2132 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 BTBD7P1-201ENST00000447253 1453 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 FO393414.2-201ENST00000405153 598 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 AP006294.1-201ENST00000415407 339 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.67■□□□□ 0.1
CCDC97Q96F63 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 SON-203ENST00000381679 7860 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC97Q96F63 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC97Q96F63 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC105250.1-201ENST00000509378 2057 ntBASIC15.66■□□□□ 0.1
CCDC97Q96F63 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 DFFBP1-201ENST00000433250 979 ntBASIC15.66■□□□□ 0.1
CCDC97Q96F63 U91328.1-201ENST00000437528 223 ntBASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 MIR6799-201ENST00000620297 69 ntBASIC15.66■□□□□ 0.1
CCDC97Q96F63 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC073347.1-201ENST00000421633 2643 ntBASIC15.66■□□□□ 0.1
CCDC97Q96F63 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC97Q96F63 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC97Q96F63 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 PPT1-215ENST00000641471 2368 ntBASIC15.65■□□□□ 0.1
CCDC97Q96F63 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms