Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 AC104457.1-201ENST00000401024 814 ntBASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 METTL21AP1-201ENST00000438852 635 ntBASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 AC015656.1-201ENST00000624209 3578 ntBASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXRED1Q96CU9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AL137784.3-201ENST00000623858 2288 ntBASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 SPDYE7P-202ENST00000420373 878 ntBASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CNN2P2-201ENST00000443536 909 ntBASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CNN2P3-201ENST00000450201 906 ntBASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 AL136317.3-201ENST00000618497 906 ntBASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXRED1Q96CU9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC138969.3-201ENST00000546612 1459 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC138932.2-201ENST00000548268 1459 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC126755.4-201ENST00000549796 1459 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 HSPA7-201ENST00000445535 1927 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms