Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AC007950.2-201ENST00000615045 2347 ntBASIC18.13■□□□□ 0.49
SNED1Q8TER0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 AC023090.2-201ENST00000625182 2110 ntBASIC18.12■□□□□ 0.49
SNED1Q8TER0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 MRPL22P1-201ENST00000505398 616 ntBASIC18.12■□□□□ 0.49
SNED1Q8TER0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 MIR3188-201ENST00000583494 85 ntBASIC18.12■□□□□ 0.49
SNED1Q8TER0 AC005041.3-201ENST00000606287 649 ntBASIC18.12■□□□□ 0.49
SNED1Q8TER0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNED1Q8TER0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNED1Q8TER0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 PIN4P1-201ENST00000451079 396 ntBASIC18.11■□□□□ 0.49
SNED1Q8TER0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.11■□□□□ 0.49
SNED1Q8TER0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNED1Q8TER0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 OR2R1P-201ENST00000441404 914 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 ORAOV1P1-201ENST00000503108 395 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 AC008723.1-201ENST00000506922 207 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 AC005357.2-202ENST00000590507 1060 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 MIR6769A-201ENST00000617340 73 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 AC009560.1-201ENST00000620208 434 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 AL161773.1-201ENST00000624845 863 ntBASIC18.1■□□□□ 0.49
SNED1Q8TER0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.1■□□□□ 0.49
SNED1Q8TER0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNED1Q8TER0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms