Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC012508.2-201ENST00000567613 1472 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 STRCP1-201ENST00000509801 5328 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC073621.1-201ENST00000392730 636 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC092474.2-201ENST00000424288 719 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 FGFR3P6-201ENST00000457012 610 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 MIR3180-1-201ENST00000580374 94 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 MIR3180-3-201ENST00000584616 94 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AL732292.2-201ENST00000609649 430 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AL136982.4-201ENST00000437689 1740 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AC007787.1-201ENST00000588095 1583 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AL607033.1-201ENST00000623900 1599 ntBASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC9.92□□□□□ -0.82
SMIM11BQ8TCY0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMIM11BQ8TCY0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms