Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 TUBB3P1-201ENST00000405796 1332 ntBASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 DUX4L27-201ENST00000554796 1261 ntBASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CRLF3Q8IUI8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC097359.2-201ENST00000604992 2389 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SPDYE7P-202ENST00000420373 878 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC142381.1-201ENST00000426099 345 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC051619.7-201ENST00000568314 623 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC005498.2-205ENST00000593218 784 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 MIR6080-201ENST00000617359 66 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 AC018529.2-202ENST00000611482 3087 ntBASIC15.28■□□□□ 0.04
CRLF3Q8IUI8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.27■□□□□ 0.04
CRLF3Q8IUI8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CRLF3Q8IUI8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.27■□□□□ 0.04
CRLF3Q8IUI8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms