Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.82□□□□□ -0.2
SHFQ7M4L6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 MIR3687-2-201ENST00000577708 61 ntBASIC13.82□□□□□ -0.2
SHFQ7M4L6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 MIR3687-1-201ENST00000614492 61 ntBASIC13.82□□□□□ -0.2
SHFQ7M4L6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.82□□□□□ -0.2
SHFQ7M4L6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AC018442.1-201ENST00000421439 2061 ntBASIC13.82□□□□□ -0.2
SHFQ7M4L6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.82□□□□□ -0.2
SHFQ7M4L6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHFQ7M4L6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SPDYE7P-202ENST00000420373 878 ntBASIC13.81□□□□□ -0.2
SHFQ7M4L6 MTND6P24-201ENST00000440466 518 ntBASIC13.81□□□□□ -0.2
SHFQ7M4L6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MIR4469-201ENST00000583919 79 ntBASIC13.81□□□□□ -0.2
SHFQ7M4L6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 AL133215.2-201ENST00000609242 977 ntBASIC13.81□□□□□ -0.2
SHFQ7M4L6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MIR6069-201ENST00000620069 79 ntBASIC13.81□□□□□ -0.2
SHFQ7M4L6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms