Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.67■□□□□ 0.58
R3HDM1Q15032 AP000769.1-203ENST00000637245 208 ntBASIC18.67■□□□□ 0.58
R3HDM1Q15032 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 AC006372.4-201ENST00000624122 1543 ntBASIC18.67■□□□□ 0.58
R3HDM1Q15032 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
R3HDM1Q15032 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HDM1Q15032 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 AL137783.1-201ENST00000623494 1896 ntBASIC18.67■□□□□ 0.58
R3HDM1Q15032 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
R3HDM1Q15032 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM1Q15032 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AC098657.1-201ENST00000416270 1135 ntBASIC18.66■□□□□ 0.58
R3HDM1Q15032 EEF1DP5-201ENST00000431410 772 ntBASIC18.66■□□□□ 0.58
R3HDM1Q15032 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AC008026.2-201ENST00000495438 348 ntBASIC18.66■□□□□ 0.58
R3HDM1Q15032 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 KNOP1P1-201ENST00000542108 989 ntBASIC18.66■□□□□ 0.58
R3HDM1Q15032 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AL360270.3-201ENST00000609118 1348 ntBASIC18.66■□□□□ 0.58
R3HDM1Q15032 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM1Q15032 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
R3HDM1Q15032 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 MIR648-201ENST00000385046 94 ntBASIC18.65■□□□□ 0.58
R3HDM1Q15032 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 AL136172.1-201ENST00000598590 1394 ntBASIC18.65■□□□□ 0.58
R3HDM1Q15032 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HDM1Q15032 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM1Q15032 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
R3HDM1Q15032 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.64■□□□□ 0.58
R3HDM1Q15032 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.64■□□□□ 0.58
R3HDM1Q15032 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM1Q15032 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM1Q15032 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM1Q15032 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM1Q15032 GGTLC4P-201ENST00000402176 664 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC018638.5-201ENST00000450885 754 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HDM1Q15032 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC090820.1-201ENST00000519722 591 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC131206.1-201ENST00000538078 1211 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC023968.2-201ENST00000560593 1049 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 AC013553.1-201ENST00000560906 267 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 MIR4254-201ENST00000581063 76 ntBASIC18.64■□□□□ 0.57
R3HDM1Q15032 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HDM1Q15032 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms