Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN20P56880 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.01□□□□□ -0.17
CLDN20P56880 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14□□□□□ -0.17
CLDN20P56880 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14□□□□□ -0.17
CLDN20P56880 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 AC079781.5-202ENST00000641784 3743 ntBASIC14□□□□□ -0.17
CLDN20P56880 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 AC112693.3-201ENST00000624819 1983 ntBASIC14□□□□□ -0.17
CLDN20P56880 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14□□□□□ -0.17
CLDN20P56880 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN20P56880 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 AL442647.2-201ENST00000429864 857 ntBASIC14□□□□□ -0.17
CLDN20P56880 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14□□□□□ -0.17
CLDN20P56880 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14□□□□□ -0.17
CLDN20P56880 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 INE1-201ENST00000456273 945 ntBASIC14□□□□□ -0.17
CLDN20P56880 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14□□□□□ -0.17
CLDN20P56880 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14□□□□□ -0.17
CLDN20P56880 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN20P56880 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN20P56880 AL035252.4-201ENST00000624174 288 ntBASIC14□□□□□ -0.17
CLDN20P56880 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 AL359183.1-201ENST00000623796 2132 ntBASIC14□□□□□ -0.17
CLDN20P56880 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CLDN20P56880 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 FGD5P1-202ENST00000614866 2498 ntBASIC14□□□□□ -0.17
CLDN20P56880 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN20P56880 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN20P56880 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 CU639417.3-201ENST00000624240 1404 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms