Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC3P51654 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC3P51654 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC3P51654 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GPC3P51654 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC3P51654 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC3P51654 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GPC3P51654 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC3P51654 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC3P51654 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 MROH4P-201ENST00000431302 1578 ntBASIC16.74■□□□□ 0.27
GPC3P51654 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GPC3P51654 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.74■□□□□ 0.27
GPC3P51654 GOLGA2P4-201ENST00000441462 777 ntBASIC16.74■□□□□ 0.27
GPC3P51654 PFN1P12-201ENST00000455938 534 ntBASIC16.74■□□□□ 0.27
GPC3P51654 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.74■□□□□ 0.27
GPC3P51654 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 C2orf69P2-201ENST00000562032 1123 ntBASIC16.74■□□□□ 0.27
GPC3P51654 DUX4L47-201ENST00000566374 394 ntBASIC16.74■□□□□ 0.27
GPC3P51654 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.74■□□□□ 0.27
GPC3P51654 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 AL603764.1-201ENST00000636452 321 ntBASIC16.74■□□□□ 0.27
GPC3P51654 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GPC3P51654 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 AC091951.1-201ENST00000512854 2465 ntBASIC16.74■□□□□ 0.27
GPC3P51654 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC3P51654 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC3P51654 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC3P51654 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 AL157414.3-201ENST00000624276 1954 ntBASIC16.73■□□□□ 0.27
GPC3P51654 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.73■□□□□ 0.27
GPC3P51654 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 CNN2P10-201ENST00000443067 918 ntBASIC16.73■□□□□ 0.27
GPC3P51654 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.73■□□□□ 0.27
GPC3P51654 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 FAM8A2P-201ENST00000528813 1142 ntBASIC16.73■□□□□ 0.27
GPC3P51654 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 AC055811.4-201ENST00000624039 1754 ntBASIC16.73■□□□□ 0.27
GPC3P51654 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC3P51654 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC3P51654 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC3P51654 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms