Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 AC006504.5-208ENST00000588784 2401 ntBASIC14.42□□□□□ -0.1
CLK1P49759 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.42□□□□□ -0.1
CLK1P49759 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 AC126365.1-201ENST00000578585 1514 ntBASIC14.41□□□□□ -0.1
CLK1P49759 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 MTND6P24-201ENST00000440466 518 ntBASIC14.41□□□□□ -0.1
CLK1P49759 FAM86GP-201ENST00000448322 971 ntBASIC14.41□□□□□ -0.1
CLK1P49759 KLF2P3-201ENST00000451977 1087 ntBASIC14.41□□□□□ -0.1
CLK1P49759 SERBP1P3-201ENST00000459980 809 ntBASIC14.41□□□□□ -0.1
CLK1P49759 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.41□□□□□ -0.1
CLK1P49759 AL079307.3-201ENST00000556114 283 ntBASIC14.41□□□□□ -0.1
CLK1P49759 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.41□□□□□ -0.1
CLK1P49759 AC140878.1-201ENST00000565277 250 ntBASIC14.41□□□□□ -0.1
CLK1P49759 AC051619.7-201ENST00000568314 623 ntBASIC14.41□□□□□ -0.1
CLK1P49759 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 REXO1L1P-202ENST00000608646 1974 ntBASIC14.41□□□□□ -0.1
CLK1P49759 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.41□□□□□ -0.1
CLK1P49759 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.41□□□□□ -0.1
CLK1P49759 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLK1P49759 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.4□□□□□ -0.1
CLK1P49759 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.4□□□□□ -0.1
CLK1P49759 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CLK1P49759 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
CLK1P49759 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 KRT8P44-201ENST00000441609 1350 ntBASIC14.4□□□□□ -0.1
CLK1P49759 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLK1P49759 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms