Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14□□□□□ -0.17
SHC1P29353 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14□□□□□ -0.17
SHC1P29353 RRP7BP-205ENST00000566851 833 ntBASIC14□□□□□ -0.17
SHC1P29353 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14□□□□□ -0.17
SHC1P29353 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 AL049840.4-201ENST00000602422 811 ntBASIC14□□□□□ -0.17
SHC1P29353 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 AC148477.4-201ENST00000613430 1793 ntBASIC14□□□□□ -0.17
SHC1P29353 AC117489.1-201ENST00000625169 3217 ntBASIC14□□□□□ -0.17
SHC1P29353 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
SHC1P29353 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14□□□□□ -0.17
SHC1P29353 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 MROH4P-201ENST00000431302 1578 ntBASIC14□□□□□ -0.17
SHC1P29353 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SHC1P29353 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SHC1P29353 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14□□□□□ -0.17
SHC1P29353 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.99□□□□□ -0.17
SHC1P29353 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.99□□□□□ -0.17
SHC1P29353 VDAC1P7-201ENST00000462417 847 ntBASIC13.99□□□□□ -0.17
SHC1P29353 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.99□□□□□ -0.17
SHC1P29353 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.99□□□□□ -0.17
SHC1P29353 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.99□□□□□ -0.17
SHC1P29353 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 AC023024.2-201ENST00000623561 1993 ntBASIC13.99□□□□□ -0.17
SHC1P29353 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SHC1P29353 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.99□□□□□ -0.17
SHC1P29353 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHC1P29353 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.98□□□□□ -0.17
SHC1P29353 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.98□□□□□ -0.17
SHC1P29353 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.98□□□□□ -0.17
SHC1P29353 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHC1P29353 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms