Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CNTFP26441 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTFP26441 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTFP26441 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTFP26441 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTFP26441 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.21■□□□□ 0.03
CNTFP26441 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 AC004967.1-201ENST00000453589 447 ntBASIC15.21■□□□□ 0.03
CNTFP26441 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CNTFP26441 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTFP26441 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 AL691403.2-201ENST00000618460 490 ntBASIC15.21■□□□□ 0.03
CNTFP26441 AL109936.8-201ENST00000641772 604 ntBASIC15.21■□□□□ 0.03
CNTFP26441 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.21■□□□□ 0.03
CNTFP26441 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTFP26441 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CNTFP26441 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CNTFP26441 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CNTFP26441 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNTFP26441 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.21■□□□□ 0.02
CNTFP26441 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CNTFP26441 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.2■□□□□ 0.02
CNTFP26441 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CNTFP26441 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.2■□□□□ 0.02
CNTFP26441 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 ZNF890P-202ENST00000530367 1156 ntBASIC15.2■□□□□ 0.02
CNTFP26441 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.2■□□□□ 0.02
CNTFP26441 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.2■□□□□ 0.02
CNTFP26441 SPDYE12P-201ENST00000618416 771 ntBASIC15.2■□□□□ 0.02
CNTFP26441 AC139530.3-201ENST00000620344 690 ntBASIC15.2■□□□□ 0.02
CNTFP26441 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.2■□□□□ 0.02
CNTFP26441 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CNTFP26441 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CNTFP26441 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTFP26441 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTFP26441 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
CNTFP26441 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
CNTFP26441 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTFP26441 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CNTFP26441 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms