Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 CICP11-201ENST00000434745 2827 ntBASIC13.91□□□□□ -0.18
CLPXO76031 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 AC129492.6-201ENST00000611383 1305 ntBASIC13.91□□□□□ -0.18
CLPXO76031 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLPXO76031 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLPXO76031 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 AC018442.1-201ENST00000421439 2061 ntBASIC13.91□□□□□ -0.18
CLPXO76031 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.91□□□□□ -0.18
CLPXO76031 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.91□□□□□ -0.18
CLPXO76031 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.91□□□□□ -0.18
CLPXO76031 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TMEM198B-204ENST00000484016 896 ntBASIC13.91□□□□□ -0.18
CLPXO76031 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.91□□□□□ -0.18
CLPXO76031 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.91□□□□□ -0.18
CLPXO76031 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.91□□□□□ -0.18
CLPXO76031 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.91□□□□□ -0.18
CLPXO76031 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.91□□□□□ -0.18
CLPXO76031 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLPXO76031 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLPXO76031 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLPXO76031 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CLPXO76031 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
CLPXO76031 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.9□□□□□ -0.18
CLPXO76031 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLPXO76031 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLPXO76031 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.9□□□□□ -0.18
CLPXO76031 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.9□□□□□ -0.18
CLPXO76031 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.9□□□□□ -0.18
CLPXO76031 AC004832.2-201ENST00000426397 482 ntBASIC13.9□□□□□ -0.18
CLPXO76031 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.9□□□□□ -0.18
CLPXO76031 PRSS29P-201ENST00000440800 595 ntBASIC13.9□□□□□ -0.18
CLPXO76031 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.9□□□□□ -0.18
CLPXO76031 AC107918.2-201ENST00000530817 355 ntBASIC13.9□□□□□ -0.18
CLPXO76031 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.9□□□□□ -0.18
CLPXO76031 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLPXO76031 AC010327.4-202ENST00000591484 748 ntBASIC13.9□□□□□ -0.18
CLPXO76031 AC004790.2-201ENST00000623588 572 ntBASIC13.9□□□□□ -0.18
CLPXO76031 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLPXO76031 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.9□□□□□ -0.18
CLPXO76031 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms